PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT30934
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 104aa    MW: 11257.8 Da    PI: 11.4663
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT30934genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.000311232323
              ETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
              C +C++ F ++  L  H++ H
  EMT30934 12 CVYCNRKFVTSQALGGHQNAH 32
              ******************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.43E-10446No hitNo description
PROSITE profilePS5015710.7831037IPR007087Zinc finger, C2H2
PROSITE patternPS0002801234IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MASEPRPGFF LCVYCNRKFV TSQALGGHQN AHKHERNVAK RRRQAAAARQ GAPAAAPDER  60
LPWHGGGFMS AAWTAAPAVK AHKHGRSRPE HGGAVVDVDL SLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169300.11e-71zinc finger protein 4-like
TrEMBLA0A453J9R93e-70A0A453J9R9_AEGTS; Uncharacterized protein
STRINGEMT309349e-71(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.19e-11zinc finger protein 7