PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT30498
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 445aa    MW: 49011 Da    PI: 5.7199
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT30498genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573107.31.1e-3363162297
    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 
               lfqrlw+eeDeiv+L+++ +f+a++g+   +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg+ +sf+++h+q +fe+++ iW+
  EMT30498  63 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRCSGNTFSFRSPHEQAVFEIARNIWR 162
               79*************************9977778***************************************8889**********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-3064161IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MVDDPSAAGA AASSSFPDAD AYGNGDSEDI DFPVDPIPNP PFSSAPVAAP ASATATVGER  60
RPLFQRLWTE EDEIVILRAF AEFTAQRGTA FASHQYDTEP FYEEMRRRLQ LDFSKSQLAE  120
KLRRLKRKYR NCVERLRCSG NTFSFRSPHE QAVFEIARNI WRPSSDKHGR DPNAADSEDD  180
ATITATNAAA NGDAKSPSSS KAHRRGRRRR TADLAADASE APQPYTSGPM PVKTEDSLPA  240
FFPHVSMDGA EPVVAPVVNT ESSVLTPLFK EMVRAMLGIG GCPSPLGLGA KVPEQPSAIL  300
GIPMDGEKWR QQRILELEVY LRRIDLLQDE IVVRNNMGII CLLVDADINT IVTLTAPIAT  360
YTGQITRAHA RQLNYQVLSF LGNDSNVQEN MMLPKLDTFV LLTNEGPGTD KRDEHWSKTK  420
HGDDGMRKGN KNGVTSDDFR TLKPP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2509220.0AK250922.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf98d18, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169680.10.0probable transcription factor At3g04930
RefseqXP_020169681.10.0probable transcription factor At3g04930
TrEMBLM8C8T30.0M8C8T3_AEGTA; Uncharacterized protein
STRINGEMT304980.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-33DNA-binding storekeeper protein-related transcriptional regulator