PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT29213
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 230aa    MW: 23789.6 Da    PI: 4.3235
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT29213genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-162977355
       AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ykGVr ++ +g Wv+eIr p   g+++r++lg++ tae Aa+a++aa ++l+g
  EMT29213 29 YKGVRMRS-WGAWVSEIRAP---GQKTRIWLGSHSTAEAAARAYDAALLCLKG 77
              9****998.**********8...557*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-262887IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-172888IPR016177DNA-binding domain
SMARTSM003801.9E-282893IPR001471AP2/ERF domain
PROSITE profilePS5103220.852887IPR001471AP2/ERF domain
PfamPF008478.7E-102977IPR001471AP2/ERF domain
PRINTSPR003674.0E-82940IPR001471AP2/ERF domain
CDDcd000185.77E-152988No hitNo description
PRINTSPR003674.0E-85167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MVKTAAAGSN GDGAVAAKQQ QLGGKMRTYK GVRMRSWGAW VSEIRAPGQK TRIWLGSHST  60
AEAAARAYDA ALLCLKGASA AADLNFPVRF PFDLPAAAMS PKSIQRVAAA AAAAGASANV  120
FDFAGADDSA SANAVDFAGA VTPEYCSSSS NASPTPSSGA ADLDGVDLLG YGYSQCSLAE  180
IEAFFQSPKC MEYAMMDPSS AFFAPAPMAM EDECSWEEGG DIALWSFSMD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-112290875Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3708701e-156AK370870.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2118P17.
GenBankAK3761001e-156AK376100.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3114M17.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156807.11e-140ethylene-responsive transcription factor ERF014-like
TrEMBLM8C5801e-164M8C580_AEGTA; Ethylene-responsive transcription factor ERF012
STRINGEMT292131e-165(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77640.12e-25ERF family protein