PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT29111
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 501aa    MW: 55809.9 Da    PI: 4.8501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT29111genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.96.1e-14306351655
       AP2   6 VrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +r+++  g+W+AeIrdps+      ++lg+f +a+eAa+a++a + k++g
  EMT29111 306 IRRRP-LGKWAAEIRDPSK---GVCVWLGTFNSAKEAARAYDAEAHKIRG 351
               68899.8*********965...4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.676301359IPR001471AP2/ERF domain
PRINTSPR003673.2E-6303314IPR001471AP2/ERF domain
PfamPF008474.5E-6306351IPR001471AP2/ERF domain
CDDcd000181.25E-23306360No hitNo description
Gene3DG3DSA:3.30.730.109.5E-24306360IPR001471AP2/ERF domain
SMARTSM003804.2E-26306365IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-16307360IPR016177DNA-binding domain
PRINTSPR003673.2E-6341361IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MARLLPHNDY DEVLVAMCGG AILADLKPSM VPWRVIQTML WPEKRRPGRG RCFTRLDGFR  60
VGLGVEDDDV DVKEFKVDIR ESDLDVGRGG VAEEDNGARL SRAIRSPPSR GPSLKLNETR  120
TEMYYTSSTV VLQLDEPGQR VYDSSGTVVL HVPSPNDDCD KVRTTIMCGR ALLADVKVPV  180
VTRKVMEVTV WPEKKKHRRG GGGGRRFTGH SGHRGLELYN EEEDFEADFE KFKADSRDYD  240
LDLGHGGVAE KDDDDEEVEI KPLVAVKRSL SHGINPDDLS TMPTASFDGP SERPAKRKRK  300
NQINVIRRRP LGKWAAEIRD PSKGVCVWLG TFNSAKEAAR AYDAEAHKIR GKKAEVNFPE  360
EPTGSADFAS NQPPVPAMNS AAPIEVPVMD IYSDQGSNSF CCSNLDWEYD TKSLDISSIA  420
PISTIAEGAK SAVVKNNTYN SLVPLFMENN AINFEPWMRY LMDDSVDELI DSLLNFDVPQ  480
DVVGNMDLWS FDDMPICGKF F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-143063611874Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020192774.10.0ethylene-responsive transcription factor 1-like
SwissprotQ6K7E66e-96ERF1_ORYSJ; Ethylene-responsive transcription factor 1
TrEMBLM8CZ080.0M8CZ08_AEGTA; Ethylene-responsive transcription factor 1
STRINGEMT291110.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.37e-22related to AP2 12
Publications ? help Back to Top
  1. Kim CY, et al.
    Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
    Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
    [PMID:10755311]
  2. Koo SC, et al.
    OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
    Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
    [PMID:19607808]
  3. Iwamoto M,Takano M
    Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
    Biotechnol. Lett., 2011. 33(1): p. 173-8
    [PMID:20872166]
  4. Serra TS, et al.
    OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
    Plant Mol. Biol., 2013. 82(4-5): p. 439-55
    [PMID:23703395]
  5. Jisha V, et al.
    Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
    PLoS ONE, 2015. 10(6): p. e0127831
    [PMID:26035591]
  6. Lourenço TF, et al.
    The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
    Plant Physiol., 2015. 169(3): p. 2275-87
    [PMID:26381316]