PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT28518
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 223aa    MW: 23989.9 Da    PI: 5.0687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT28518genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.8e-172675255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +ykGVr +k +grWv+eIr p++   r r++lg++ +ae+Aa+a +aa+ +l+g
  EMT28518 26 RYKGVRLRK-WGRWVSEIRMPNS---RERIWLGSHQSAEKAARAFDAAAVCLRG 75
              7******99.**********933...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-92675IPR001471AP2/ERF domain
CDDcd000181.07E-162685No hitNo description
PROSITE profilePS5103220.9432684IPR001471AP2/ERF domain
SMARTSM003801.1E-282690IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-262685IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-172684IPR016177DNA-binding domain
PRINTSPR003671.0E-72738IPR001471AP2/ERF domain
PRINTSPR003671.0E-74965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0002213Biological Processdefense response to insect
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009611Biological Processresponse to wounding
GO:0051301Biological Processcell division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MDGASSASGG EGSAEPHRSP PPPERRYKGV RLRKWGRWVS EIRMPNSRER IWLGSHQSAE  60
KAARAFDAAA VCLRGSRAGA LNFPEFPPDV QHVPGIVPTP ARIQAAATRH ANRPYPIPAG  120
RAMTVTTAMP SQEVTSTCNA IAVKSSPSAG NAAAYDDVLD WSFMDALPSM PASSAPGTNV  180
PVMDDVMFGF SPMPPPPPPE EPDEDMIDDD GDDHAFISDL WRF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00601PBMTransfer from AT1G74930Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191564.11e-160ethylene-responsive transcription factor ERF018-like
TrEMBLM8C3901e-160M8C390_AEGTA; Ethylene-responsive transcription factor ERF018
STRINGEMT285181e-160(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.12e-24ERF family protein