PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27000
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 220aa    MW: 23364.1 Da    PI: 8.5121
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27000genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-17119169256
       AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
               +++GVr+++ +g W+Ae+rd       r  + +lg+f+ta eAa+a++aa+++++g+
  EMT27000 119 KFRGVRRRP-WGTWAAELRDsH-----RaVHKWLGTFDTAVEAARAYDAAALEFHGH 169
               89*******.**********55.....57**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.7E-27118177IPR001471AP2/ERF domain
SMARTSM003801.2E-30119182IPR001471AP2/ERF domain
PROSITE profilePS5103221.799119176IPR001471AP2/ERF domain
SuperFamilySSF541716.41E-20119177IPR016177DNA-binding domain
PfamPF008471.6E-11119169IPR001471AP2/ERF domain
PRINTSPR003671.5E-8120131IPR001471AP2/ERF domain
PRINTSPR003671.5E-8142158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MVPRLERGGG GFQLPNAEQE NSLFLRALIS VVSADTDTVV PTLHLEPSTP PFAATPAVGM  60
RAAAAGCARC GVGVDGCLGC DFAAEAMAGS SSEGEGYSAA SFVKDGGVGK ITRRRRGRKF  120
RGVRRRPWGT WAAELRDSHR AVHKWLGTFD TAVEAARAYD AAALEFHGHH ARLNFPTTDA  180
PSWASTSTSG SSTTLPHQQH LPESIHENCR SKASSSAYMP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-181191761472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193073.11e-161ethylene-responsive transcription factor ERF109-like
TrEMBLA0A3B6QLJ91e-160A0A3B6QLJ9_WHEAT; Uncharacterized protein
TrEMBLM8BPP71e-160M8BPP7_AEGTA; Ethylene-responsive transcription factor ERF071
STRINGEMT270001e-160(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.14e-13ERF family protein