PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25962
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 445aa    MW: 48141.5 Da    PI: 4.8451
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25962genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2445.7e-14303348452
       AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                GVr ++ +g+++AeIrd + ng  +r++lg+f+t+e Aa  +++a+  
  EMT25962 303 IGVRGRP-WGKYAAEIRDSTRNG--ARVWLGTFDTPEAAALTYDQAAYT 348
               69**999.**********44465..*********************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-5152172IPR001471AP2/ERF domain
PROSITE profilePS5103220.257301359IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-19302361IPR016177DNA-binding domain
PRINTSPR003673.6E-6302313IPR001471AP2/ERF domain
PfamPF008474.2E-9303348IPR001471AP2/ERF domain
SMARTSM003809.2E-27304365IPR001471AP2/ERF domain
CDDcd000181.09E-19304360No hitNo description
Gene3DG3DSA:3.30.730.102.6E-25304360IPR001471AP2/ERF domain
PRINTSPR003673.6E-6325341IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MELNHNGYGY YDNNGSYTND GNPCYYGMSY ATSEPSYGYQ YQQSASTQPQ SSYDNHYYQY  60
DITNSSSSAA PSYAAADDIA PYAQEQHPQY LNFGGSSYQY DGAASAMGMG MGMGMDQFSA  120
LMEATSISPA APSWAEQQEA KKAKAETPQL IGVRRRPWGK YAAEIRDSTR GGGRAERREG  180
KEGKGGASAA DRRAEAAVGQ SSYDNHRYAA YDISNSSSSS AAPSYAAADD IAPYAQQQQP  240
QHLHFGGSSY QYDGAGSAMD MDMDMDMDQF SALMEATSIS PAAPSWAEQH EAKKANAESP  300
QLIGVRGRPW GKYAAEIRDS TRNGARVWLG TFDTPEAAAL TYDQAAYTSR GPAAVLNFPV  360
ERVRESLRVL KLGKAAAAGE DDSPVLALKR RHCMRKRTPK GKGQEGDMKK QPGGAAAASS  420
VLELEDLGAD YLEELLALSE QWSNE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-23295361874Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196844.11e-139ethylene-responsive transcription factor 15-like
TrEMBLM8CFN30.0M8CFN3_AEGTA; Ethylene-responsive transcription factor 1B
STRINGEMT259620.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-42ethylene response factor 1