PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25881
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 412aa    MW: 44349.9 Da    PI: 4.2062
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25881genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-185099255
       AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++ GVr+++  grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  EMT25881 50 RFGGVRQRP-AGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 99
              678******.8*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.38E-2849106No hitNo description
SMARTSM003809.0E-3350113IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.0E-2750106IPR001471AP2/ERF domain
PROSITE profilePS5103219.57250107IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-1851107IPR016177DNA-binding domain
PfamPF008479.4E-135199IPR001471AP2/ERF domain
PRINTSPR003675.0E-85162IPR001471AP2/ERF domain
PRINTSPR003675.0E-87389IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MARKRKASDD VSDADIDVGI PLSLASTDAW TTSTVAAATA ARQQQRGRKR FGGVRQRPAG  60
RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGA NTRTNFWPRP SPPAALQPPP  120
PPAMLSMQAP ALPSKVSNLL LLRLKARNQQ LLLNDATAPQ EAALLQQQMQ KQMSSSTSSC  180
QESYIHGRDD EYCFQVDDFL SEECNNSPEM EEEEEEEVEE EEEVEEEEEL DFQFMDKPAA  240
AGDEDAGLRS PVEMGAAALG GSAPVEANDV DGEPATAVQE AMRRMDYERK VSASLYALSG  300
VSECLRMRLG GGASAARDQL SGLREACRKK QRLAVQQPAS EQSSEPAAAA ADHGTEEDGK  360
AYVQEECSGS SSGSSSLTEA GSSSSLEAAN GSSDGDVLLW SSLDLAPICY MA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020171738.10.0uncharacterized protein LOC109757323
TrEMBLM8CQG00.0M8CQG0_AEGTA; Ethylene-responsive transcription factor RAP2-11
STRINGEMT258810.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54823052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-15related to AP2 11