PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25773
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GRAS
Protein Properties Length: 263aa    MW: 29798.2 Da    PI: 5.9146
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25773genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS179.82e-5510261140374
      GRAS 140 pslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrll.................desvslese 223
                 lR+T v++    + e l+ t+  La  Ae+l++ f+f+++  +  + l++e L++ ++Eal++ + lqlhrll                  + +++  +
  EMT25773  10 QILRLTIVNE----EDEFLSVTRGLLAWEAESLHIGFQFHPVKLHINQLLSIEPLNFMSDEALVIVSTLQLHRLLadefvevaahphdrkgkVQAHATMTR 106
               579*******....8999***********************866677788*************************************99998444444446 PP

      GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleea 322
                d++L+ + +lsPk++ v+eqeadhn+ +F+ rf +al+yy alfd+le+++p+     er+ +Er ll +ei+++vac ga++rerhe++ kW er+++a
  EMT25773 107 ADALLRDLAELSPKLMLVTEQEADHND-EFMGRFDNALNYYGALFDALEESIPARGlaIERSDMERCLLLQEIRDIVACDGAQHRERHERMVKWAERMKAA 206
               99***********************76.7************************998779****************************************** PP

      GRAS 323 GFkpvplsekaakqaklllrkvk..sdgyrve.eesgslvlgWkdrpLvsvSaWr 374
               GF ++++s +a++q  +l ++v    ++yrv  +++ ++++ W d pL+svS Wr
  EMT25773 207 GFASAAMSADAVAQTVMLGQMVTgcRREYRVSsKKDLCFFIHWCDIPLFSVSTWR 261
               *********************9987788***945577888**************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098523.9161238IPR005202Transcription factor GRAS
PfamPF035146.8E-5310261IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MRLGAGAHNQ ILRLTIVNEE DEFLSVTRGL LAWEAESLHI GFQFHPVKLH INQLLSIEPL  60
NFMSDEALVI VSTLQLHRLL ADEFVEVAAH PHDRKGKVQA HATMTRADAL LRDLAELSPK  120
LMLVTEQEAD HNDEFMGRFD NALNYYGALF DALEESIPAR GLAIERSDME RCLLLQEIRD  180
IVACDGAQHR ERHERMVKWA ERMKAAGFAS AAMSADAVAQ TVMLGQMVTG CRREYRVSSK  240
KDLCFFIHWC DIPLFSVSTW RAV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8BVE40.0M8BVE4_AEGTA; Uncharacterized protein
STRINGMLOC_74503.11e-143(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137161330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-24scarecrow-like 3