PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT24284
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CAMTA
Protein Properties Length: 1152aa    MW: 126876 Da    PI: 5.3961
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT24284genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1172.37.1e-541422573117
      CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102
               +e k+rwlk++e++ iL n+e+ ++t+e++++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e+np fqrrc+w+L
  EMT24284 142 REaKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGEQNPYFQRRCFWML 242
               4559************************************************************************************************* PP

      CG-1 103 eeelekivlvhylev 117
               e ++++ivlv+y+ev
  EMT24284 243 EPAYDHIVLVQYREV 257
               *************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.685137263IPR005559CG-1 DNA-binding domain
SMARTSM010761.7E-69140258IPR005559CG-1 DNA-binding domain
PfamPF038592.0E-46143256IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.108.7E-7579670IPR013783Immunoglobulin-like fold
SuperFamilySSF812969.65E-16579661IPR014756Immunoglobulin E-set
PfamPF018332.7E-7579660IPR002909IPT domain
Gene3DG3DSA:1.25.40.201.6E-14771865IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.71E-14772867IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.247773865IPR020683Ankyrin repeat-containing domain
CDDcd002041.98E-9778865No hitNo description
SMARTSM002489.9E-5806835IPR002110Ankyrin repeat
PROSITE profilePS5008811.167806838IPR002110Ankyrin repeat
PfamPF136372.8E-5808865No hitNo description
SMARTSM0001533926948IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.218927956IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.38E-69731032IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000156.99861006IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.4629861014IPR000048IQ motif, EF-hand binding site
PfamPF006120.00319871005IPR000048IQ motif, EF-hand binding site
SMARTSM000153.0E-610071029IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.4210081036IPR000048IQ motif, EF-hand binding site
PfamPF006123.7E-510091029IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1152 aa     Download sequence    Send to blast
MACCFAVSAA WATMNSASMS SMLNPGAGAS SYSGCSSSSS GSATSIRAGC CSSPSSSSAF  60
SSSSSGSSKS RGSPAAMPAA RGVPRPDLLL DLVPALRSCL FGVGASISWS SRPTPSFHES  120
FEAAGSPQVT MSQSFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP PNKPPSGALF  180
LYNRRVNRFF RKDGYAWRRK KDGRTVGEAH ERLKVGNIDA LSCYYAHGEQ NPYFQRRCFW  240
MLEPAYDHIV LVQYREVAEG RYYSTLSNGS AGSLSTLSYP NDIHGKHGST SDFSEGNESH  300
QSSVTEVSSY SANKEYNHDS GVLLSIPELQ QSTVMGIPEL DQSSLERSSE FCMVNNNDST  360
NTSGLNQALK SIAEQLSLGD DDYIYINQAR SLDFTTNTEA ADVQGNQTNN SLADDEANQI  420
RPEGAHGVGR GISSSWENVL QSDLGLPASS TYQFGAHYQQ SSEYQPPGGL DSSNLQLQIS  480
AAKRFLLGSE DTIDSPSYNF IPRDEGINGI NTLSAHDSSL ESCLNPDWQR TTPVTLQSSS  540
YQSNSCGYEI SEFFDNGQFE PSSEEDTRLA LKQKQQFSIR EISPEWAFCY EITKVIITGD  600
FLCDPSNICW AVMFGDTEVP VEIVQPGVLR CHTPLHSAGK LTLCITTGNR KVCSEIKDFE  660
FRAKSTASSF TDFAPSSMKS TEELSLIAKF ARILLCDNRS SAASGDDPQP GQSPKLKMNE  720
DNWQRLINEL DVGCENPLSR VDWIMEELLK SKLQQWLSLR LQGDDGTCSL SKNEQGIIHL  780
ISALGYDWAL YSVLGAGVGI NLRDSNGWTA LHWAAYYGRE KMVAALLAAG ASAPAVTDPT  840
AQDPVGKSAA FLASERGHVG LAGYLSEVAL TSYLASLTIE ESGISEGLAA IEAERAVESI  900
SQRSAQLHGG TEDELSLKDS LAAVRNAAQA AARIQNAFRA FSFRRRQHKD ARLKDEYGMT  960
QEDIDELAAA SRLYYQHHVS NGQFCDKAAV SIQKKYRGWK GRKNFLQMRR NVVKIQAHVR  1020
GHQVRKKYKT FVSTVSVLEK VILRWRRKGH GLRGFRAEQS VMIEAEEGEE EDDDEFDDDE  1080
AVKIFRRQKV DESVKESVSR VLSMVDSPEA RMQYRRMLEE FRQATAELGA SDKATSSILD  1140
NDLLVEIDKF TC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010239810.10.0PREDICTED: calmodulin-binding transcription activator 4 isoform X2
TrEMBLM8BQN80.0M8BQN8_AEGTA; Calmodulin-binding transcription activator 4
STRINGMLOC_58709.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62383241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-148Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains