PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT23900
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 1443aa    MW: 160365 Da    PI: 6.8048
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT23900genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.9e-1776125255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a++ a+++++g
  EMT23900  76 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 125
               59****999.**********8...2.359***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.7E-3576139IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1976133IPR016177DNA-binding domain
PfamPF008479.5E-1176125IPR001471AP2/ERF domain
PROSITE profilePS5103221.79976133IPR001471AP2/ERF domain
PRINTSPR003672.8E-87788IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2977134IPR001471AP2/ERF domain
CDDcd000184.22E-1877135No hitNo description
PRINTSPR003672.8E-899115IPR001471AP2/ERF domain
SuperFamilySSF525408.21E-9471623IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF001762.0E-6481611IPR000330SNF2-related, N-terminal domain
SuperFamilySSF525403.19E-17649887IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1443 aa     Download sequence    Send to blast
METGGSKREG DCPGQERKKK VRRRSTGPDS VAETIKKWKE ENQKLQQENG SRKAPAKGSK  60
KGCMAGKGGP ENSNCAYRGV RQRTWGKWVA EIREPNRGNR LWLGSFPTAV EAARAYDDAA  120
RAMYGAKARV NFSEQSPDAN SGCTLAPPLP MSNGATAASH PSDGKDESES PPSLISNAPT  180
AALHRSDAKD ESESAGTVAR KVKKEVSNDL RSTHEEHKTL EVSQPKGKAL HKAANELGIA  240
LRVGIKLRHI RKSYFCRSYY ILNCCRKVQP HRLTDLCPQN RLAESSLAVE DRGQSTGHSR  300
RSGSSSLRSE PFPTIYSEQH KSMPGDGGPI SIQKEGPASR QLKVILSVIS PLYNQLTRWF  360
NVPPEPPNRK AEQNPAPKPS EQADNGHAGA QVDATSALTS QILKLDIKSR RTTNQSFRGV  420
KQCPVQKLQR LPDGCHPDFD NDHLYCVNKL LESWSKSHGS VLVDDKEHIL KTILFTMVVL  480
ADARQPFLIV TTTASLSLWE VQFNKLAPHI NVVVHDGRKD MLKSIQAQQF YENGSHITSQ  540
VLLSHPEAIL EDIEPIARIG WEAIIVDYYQ HLALKYLEQL KQLCTGFRVL LVSSPIEDIP  600
EYMNMLAFLK SGQKDNSGYV DTADALEMLK RRFAHHIAYE RKADSSKFLE HWVPAYISQV  660
QLGVYCSILL SNSSVLQSKK KANSVEALRD ILLSLSECCN HPYLRECLEA SPVNNPDMTE  720
TVDIGVHASG KLLLLDKMLK EISNRRLRVI VLFQSGGAGA NPMGDILEGV VCHRFGPESY  780
ERVKCGAVMS SKQAAIDMFN DKTKGRFVLL IESRACLPSI KLLSVDAVII YSSDWNPSND  840
LKALQRINIE SQLKYVSIFR LYTPFTVEEN NFLLAKQGRL IDSNIQDVMH SSSHSLLSWG  900
AQFLFTRFDE LLQDRYSSKH SERGTNFMDE VILEFLTKLP TNTEDSSKIN SVYISKANMS  960
GEFYSRSITV IGEKEGMSML DGDPSVFWLD LLDGKSPCWS YISELTQSIN RMLQNIEEPA  1020
QVAAEETDEA TNVSVTQQRE CHVSVTQQRE CHVSVDVFPN MAVERRIDLV DDVFPFGENN  1080
ILHKQQAEIS NLVTHSQNKQ ILRIGATQIC GSSMHMQQLR NLPAQQSLAT LPHPPAEAEP  1140
AGIPGMEAMT CLQSMQYQPT EAEWGGILGA LAAHGSQPEM QPSTSMQDVL FEKTDLSGMP  1200
LLGSMNARQS VEPSWDLHAG EEPACTLGMV TTDKLQSEIQ QSATVHDRPA EAEGTSTLGT  1260
RALQNLHPEM QSSTAMHHVP LERAHSEGRS QTGFQPNTSP GPEQLSQLLF FEEELNQVLS  1320
ASDQPLEDMS EMYKHHINLL REAHEQKKSQ LQIERYREIE KVNRKYYSLL QKEDPTLLHS  1380
QMGLVDSYKE ASVNKSPAQD FLGEVAPSSA AQGTSERPAM VLPPKSSPAQ TTASPGAPPY  1440
DHQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ftx_W3e-35443914198679Chromatin-remodeling ATPase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020182859.10.0uncharacterized protein LOC109768534
TrEMBLM8BG300.0M8BG30_AEGTA; Dehydration-responsive element-binding protein 2A
STRINGEMT239000.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP165236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.11e-31ERF family protein