PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT23855
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 278aa    MW: 29318.3 Da    PI: 4.4029
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT23855genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-1891141155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  EMT23855  91 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 141
               68*****998.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575130No hitNo description
PfamPF008477.1E-1391141IPR001471AP2/ERF domain
PROSITE profilePS5103223.30192150IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-1992150IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.2E-3192151IPR001471AP2/ERF domain
SMARTSM003807.6E-3692156IPR001471AP2/ERF domain
PRINTSPR003671.4E-1093104IPR001471AP2/ERF domain
CDDcd000181.67E-3093152No hitNo description
PRINTSPR003671.4E-10115131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MAPARELQET SSSSSSSTSS YTTSSTSMSC SSTVTDSSSC PSSPASAANA VKEAPRKRQL  60
DEGEGGREET EEGKATTTKK KSKRSSDGKH PVYRGVRMRA WGKWVSEIRE PRKKSRIWLG  120
TFPTAEMAAR AHDVAALAIK GARSAHLNFP ELADVLPRAA SPAPKDVQAA AALAAAFTSS  180
PPPMSTDQSE EEEGLIQEET VKNDAGADAT APPESAATAT SCGAAAEQAE EEELQLFDLP  240
DLLPDIEDGV GVSTMGAPLP DVEEGNADLR LEEPLLWE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1684151673Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00312DAPTransfer from AT2G44940Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3738740.0AK373874.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3046B05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020150034.10.0ethylene-responsive transcription factor ERF039-like
TrEMBLM8BFZ50.0M8BFZ5_AEGTA; Ethylene-responsive transcription factor ERF034
STRINGEMT238550.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-38ERF family protein