PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21934
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 231aa    MW: 24328.2 Da    PI: 5.9607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21934genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-183686155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              + ++GVr++  +g+WvAeIr+p   + r +r +lg+f +a +Aa+a++aa+++l+g
  EMT21934 36 CPFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFASALDAARAYDAAARALYG 86
              679****999.**********8...3.35***********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.4423794IPR001471AP2/ERF domain
SMARTSM003803.3E-3137100IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-283894IPR001471AP2/ERF domain
PfamPF008471.0E-113886IPR001471AP2/ERF domain
PRINTSPR003678.6E-93849IPR001471AP2/ERF domain
CDDcd000182.25E-153869No hitNo description
SuperFamilySSF541711.31E-193895IPR016177DNA-binding domain
PRINTSPR003678.6E-96076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MEQEVVAGMK QKKCCPLRRS RKGCMKGKGG PDNQQCPFRG VRQRTWGKWV AEIREPNRGA  60
RLWLGTFASA LDAARAYDAA ARALYGDCAR LNLSASPSQM QHPPAQGSGG ANGNSAPGTP  120
CCSSNNSNSS ASTPTGTPTD MDCSAWMQPS YCYSTAEAPE DFEAYVTRLP KAEDFGLEGF  180
QEVPLEVLAE AGGGVSIWDL SIAPEMAAAA ASSAAASACT VPQQPLQQPS C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-133893662ATERF1
3gcc_A2e-133893662ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not induced by high-salt and drought stresses. {ECO:0000269|PubMed:20049613}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9520581e-103EU952058.1 Zea mays clone 1066007 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020188398.11e-170dehydration-responsive element-binding protein 2C-like
SwissprotQ84ZA17e-85DRE2C_ORYSJ; Dehydration-responsive element-binding protein 2C
TrEMBLA0A3B5ZX571e-168A0A3B5ZX57_WHEAT; Uncharacterized protein
TrEMBLA0A452Z1741e-168A0A452Z174_AEGTS; Uncharacterized protein
TrEMBLM8BIZ41e-168M8BIZ4_AEGTA; Dehydration-responsive element-binding protein 2G
STRINGEMT219341e-169(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55103454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.13e-29ERF family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]