PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21733
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 177aa    MW: 18793.5 Da    PI: 8.7157
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21733genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.000362850123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C+ C+++F++   L  H  +H
  EMT21733 28 FVCKTCDRVFPSFQALGGHRASH 50
              89**********99999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.28E-82688No hitNo description
PfamPF139121.5E-122752IPR007087Zinc finger, C2H2
PROSITE profilePS501579.392855IPR007087Zinc finger, C2H2
SMARTSM003550.122850IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803050IPR007087Zinc finger, C2H2
PfamPF139121.8E-86690IPR007087Zinc finger, C2H2
SMARTSM003552.56688IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806888IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MARVLLLVSR EQAMPMPARG DRAPERAFVC KTCDRVFPSF QALGGHRASH KKPRLDGDGD  60
FKPKMHGCSI CGLEFAVGQA LGGHMRRHRA MVAGGHGVTA VRPAITTNNP NDNSNAVVVV  120
GSAGGIKRGL WLDLHPPPCD DLCGSDVDLS ARGRAAAGYT FHQFLDAGTM AVDCVGY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201498.11e-119zinc finger protein ZAT12-like
TrEMBLM8BJ201e-126M8BJ20_AEGTA; Uncharacterized protein
STRINGEMT217331e-127(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50137157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.12e-24C2H2 family protein