PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21044
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 421aa    MW: 46931.5 Da    PI: 9.0036
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21044genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.91e-143344161699
               EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  16 lvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                +l k++ + h gkk + + l+l+   ++r+W+ +l  +++ +r+ + kGW +F++ n+L+egD ++Fkl+++ +  +++v ++r+
  EMT21044 334 RYLNKNYGAGHHGKK-NMISLVLQReGKSRTWNTEL--QRRVDRTSILKGWASFARGNRLREGDLCLFKLMESvEPLKMMVYIIRR 416
               455566655554444.4466777774556*******..88888888999**********************999*********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.5E-10106209IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.26E-9107208IPR015300DNA-binding pseudobarrel domain
CDDcd100177.80E-9111210No hitNo description
PROSITE profilePS508637.683112215IPR003340B3 DNA binding domain
SMARTSM010190.0038113215IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.6E-14299418IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.42E-14300419IPR015300DNA-binding pseudobarrel domain
CDDcd100174.14E-13305415No hitNo description
SMARTSM010191.6E-5321417IPR003340B3 DNA binding domain
PfamPF023623.9E-12335416IPR003340B3 DNA binding domain
PROSITE profilePS5086311.815353417IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MSNHCECCER MIRFIRETCC AGTKAASDVT KPSSRYVDNS SSSHNGTTQS SAGEGSDSDG  60
SQKESSYSHQ KSAKKAAISD SSEELSGWCY LTEAQKVKIH ALVEKIRPEI PVLVVQMKKT  120
SANIGNLVIR KDYALKYFPC EATDIILQLP GKNKEWRCKL QIRPSGMVGA GRRNLYLGSF  180
VHDNCVQEGD ICLFQPLAKV KEEKFTVIVH LLHKEGIRRS SGGRADMAHT AAERRICAKT  240
ALTASVKEEP ATDGEDTLSL GSEEDGGNSE GASETPFILP DRPFVTPAQE QKVREKVEAI  300
DSTVPVYVAI LNRSNVRYDN FTTFLTFGAK YASRYLNKNY GAGHHGKKNM ISLVLQREGK  360
SRTWNTELQR RVDRTSILKG WASFARGNRL REGDLCLFKL MESVEPLKMM VYIIRREKCL  420
A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155765.10.0B3 domain-containing protein Os03g0619600-like
TrEMBLM8BGD90.0M8BGD9_AEGTA; B3 domain-containing protein
STRINGEMT210440.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172