PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20090
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 212aa    MW: 23291.7 Da    PI: 4.3546
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20090genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.3e-1689128144
       AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAak 44 
               ++++GVr+++ +g+++AeIrd +     r  r +lg+f+taeeAa+
  EMT20090  89 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRLWLGTFDTAEEAAR 128
               69********.**********88.....55**************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.6E-989128IPR001471AP2/ERF domain
CDDcd000186.00E-1989128No hitNo description
PROSITE profilePS5103216.9990132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-1990128IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-1490129IPR016177DNA-binding domain
SMARTSM003805.1E-1590139IPR001471AP2/ERF domain
PRINTSPR003672.2E-1091102IPR001471AP2/ERF domain
PRINTSPR003672.2E-10113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MSRSRTVRIY WDDPDVTDSS SEDDEGCAAR RVGRMVRELP PAPAPLVQAA AASPEQCSAG  60
DDDLPRRVGG CTGARKRLAK GGGSAAQSTK FRGVRRRPWG KYAAEIRDPW RGVRLWLGTF  120
DTAEEAARVL SVPEELGEFV PFEDAPVYSS SSFWDFEPQS GFLYAEPSSA EEASWDASAG  180
GEAEPWAAPV QENDYFQDLR DLFPLNQLPA IF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1581128553Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-177HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184683.12e-86pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLN1R2K91e-149N1R2K9_AEGTA; Ethylene-responsive transcription factor CRF4
STRINGEMT200901e-150(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-19cytokinin response factor 4