PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19762
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 271aa    MW: 29453.3 Da    PI: 4.2252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19762genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.2e-185199355
       AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              y+GVr+++ +g+W+AeIrdp+    +  rf+lg+f +a++Aa a++ a++ ++g
  EMT19762 51 YRGVRRRP-WGKWAAEIRDPV----KgVRFWLGTFPSADDAAHAYDDAARDFRG 99
              9*******.**********75....44**********************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.99950107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-3150108IPR001471AP2/ERF domain
SMARTSM003802.2E-3450113IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2151108IPR016177DNA-binding domain
PfamPF008471.8E-115199IPR001471AP2/ERF domain
CDDcd000182.07E-1951109No hitNo description
PRINTSPR003671.7E-125162IPR001471AP2/ERF domain
PRINTSPR003671.7E-1289109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MCRGAILAEL IPSAPPRSVT AVHLLPKRQR VDDFEAAFKR FDEDSEEEEE YRGVRRRPWG  60
KWAAEIRDPV KGVRFWLGTF PSADDAAHAY DDAARDFRGA NARLNFPSSP TTSAPKCRVA  120
AKPTPFVVID LDDDEEGDAG AAHAGGMSSE SSGALPDFSW QGMSASGEVM AQSVHAEVES  180
SHSVVDLGSA KKRPRIEADA VLPAAADDSA DQLLDPFVFD DQFGFLDSSS YEWLDGLFGA  240
DAEKIDDSQL GLWSFGDHDC LAEDSARVQV E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-1949107463ATERF1
3gcc_A5e-1949107463ATERF1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY7813530.0AY781353.1 Triticum aestivum ethylene-responsive element binding protein 2 (EREB2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797880.11e-63ethylene-responsive transcription factor ERF073-like
TrEMBLR7WBA90.0R7WBA9_AEGTA; Ethylene-responsive transcription factor ERF071
STRINGEMT197620.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43712654
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.12e-20ERF family protein