PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19311
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family G2-like
Protein Properties Length: 396aa    MW: 43859.1 Da    PI: 6.629
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19311genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.31.1e-25222286155
   G2-like   1 kprlrWtpeLHerFveaveqLGGse..........kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k+r+rWt eLHerFvea+++LGG+e          +AtPk +l+lmkv+gLt+ hvkSHLQ YR 
  EMT19311 222 KTRMRWTLELHERFVEALKKLGGPEsrvipllnfwEATPKGVLKLMKVEGLTIFHVKSHLQNYRH 286
               68**********************955555555555****************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.94E-13219286IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.5E-25221286IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-18222286IPR006447Myb domain, plants
PfamPF002494.3E-8224285IPR001005SANT/Myb domain
PfamPF143797.3E-21320365IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MSTQSVIPVK HFIAPDIRAH TCNAPQPSVH QMFNAKSDIY SSADDTSRVS YADLSDPNSS  60
SSSTFCTSMY SSSSTKPSGF SFLPHPSKCE QQQVSAAKSS SSSLLFAADP STGVHGDLEH  120
PLDLKDFLNL SGNASDSSFR GGGNAMDFSE QLEFQFLSEQ LGIAITDNEE SPRLDDIYGI  180
PPQCSPSLVS PSSDHEDLRS GGSPVEAQLT SSHSSSGATC SKTRMRWTLE LHERFVEALK  240
KLGGPESRVI PLLNFWEATP KGVLKLMKVE GLTIFHVKSH LQNYRHVKYI PEKKEVKRPC  300
SEDNNAKSAS GIDSGNKKSF QMAETLRMQM EVQKQLHEQL EVQRELQLRI EEHARYLQQI  360
LEQQKARKST VPKPEEKTEV NTTSAPPLKR KISDTE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP3304840.0KP330484.1 Triticum aestivum MYB transcription factor SM153-2 mRNA, complete cds.
GenBankKP3304830.0KP330483.1 Triticum aestivum MYB transcription factor SM153-1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003570911.11e-155PREDICTED: protein PHR1-LIKE 1-like
TrEMBLR7WAQ00.0R7WAQ0_AEGTA; Myb family transcription factor APL
STRINGMLOC_5837.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45263769
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.26e-70G2-like family protein