PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18835
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 389aa    MW: 42615.6 Da    PI: 4.5854
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18835genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75e-17115164255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +++G+r+++ +g+W+AeIrdps+     r++lg+f +ae Aa+a++  + +++g
  EMT18835 115 KFRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNSAEAAARAYDVEAHRIYG 164
               89*******.**********965...4*******************99999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.33E-30115173No hitNo description
PROSITE profilePS5103223.09115172IPR001471AP2/ERF domain
SMARTSM003804.8E-35115178IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-21115173IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-29115173IPR001471AP2/ERF domain
PfamPF008474.6E-10115162IPR001471AP2/ERF domain
PRINTSPR003674.6E-10116127IPR001471AP2/ERF domain
PRINTSPR003674.6E-10138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MYGGVSLADL EVPMVTRKVT EARLWHNKKN PRLGGSGDMR FTGLGGRRGL GLDDNKEDFE  60
ADFEEFEADS RDSDLDLGLS GVDEKDDDEE VIEIKPVAAI KNRSLFQAKI KRKNKFRGIR  120
QRPWGKWAAE IRDPSKGVRV WLGTFNSAEA AARAYDVEAH RIYGNKANVN FPEEPIVPQK  180
RRTRRAAPKA PKLSASREPT AIPVVNNLAN PKAFVYPSAD FASNQSLALH ENLSFVPAMN  240
SDAPVEASVM NLHSNQGSNS FGYSEMGWNY DTKTPDISST APISTIADGV ESALVQSNPY  300
NSVVTAEGAE SAALVQSNTY NSVVPPAMEN NDVDIVALVR LLMDDGVVEP IDSLLNFDVP  360
QDVVGNMDIW SSDDMPMCGE FFEGSKPCI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-18116172360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-18116172663ATERF1
3gcc_A1e-18116172663ATERF1
5wx9_A6e-181141741374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178184QKRRTRR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157944.10.0ethylene-responsive transcription factor 1-like
SwissprotQ6K7E61e-100ERF1_ORYSJ; Ethylene-responsive transcription factor 1
TrEMBLA0A453N6460.0A0A453N646_AEGTS; Uncharacterized protein
TrEMBLR7WEF70.0R7WEF7_AEGTA; Ethylene-responsive transcription factor 1
STRINGEMT188350.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.37e-25related to AP2 2
Publications ? help Back to Top
  1. Kim CY, et al.
    Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
    Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
    [PMID:10755311]
  2. Koo SC, et al.
    OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
    Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
    [PMID:19607808]
  3. Iwamoto M,Takano M
    Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
    Biotechnol. Lett., 2011. 33(1): p. 173-8
    [PMID:20872166]
  4. Serra TS, et al.
    OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
    Plant Mol. Biol., 2013. 82(4-5): p. 439-55
    [PMID:23703395]
  5. Jisha V, et al.
    Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
    PLoS ONE, 2015. 10(6): p. e0127831
    [PMID:26035591]
  6. Lourenço TF, et al.
    The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
    Plant Physiol., 2015. 169(3): p. 2275-87
    [PMID:26381316]