PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT17676
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family G2-like
Protein Properties Length: 207aa    MW: 22425.6 Da    PI: 5.074
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT17676genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.64.3e-1619472755
   G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
              AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  EMT17676 19 ATPKSVLELMDVKDLTLAHVKSHLQMYRT 47
              9***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.18E-51848IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-141948IPR009057Homeodomain-like
TIGRFAMsTIGR015574.1E-111947IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MAPIDDEQMA PGGMRSPGAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKN TERPAASSDQ  60
ADGFENGSSG EICDDNLLDL RGGGRPEAVA AATRNGRFAA NDDDRSIGAG ATHGGALWNS  120
SSRGATPFVN IIIKYRSYSH GDKQWEEDWS GFPCDSNNES MQSFKDHMQS KSLEILSDMN  180
SCLSETTSSA SAPNLDFTLG RPHQRRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9570085e-56EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds.
GenBankKJ7268195e-56KJ726819.1 Zea mays clone pUT3358 G2-like transcription factor (GLK55) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571453.14e-83PREDICTED: probable transcription factor KAN2
TrEMBLN1R2421e-154N1R242_AEGTA; Uncharacterized protein
STRINGMLOC_73347.21e-107(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-23G2-like family protein