PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT17604
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 119aa    MW: 12631.8 Da    PI: 5.2697
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT17604genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-19758155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++y+GVr ++ +g+++AeIrdp  +   +r++lg+f+ta+eAa+a+++a+ + +g
  EMT17604  7 TKYRGVRTRP-WGKFAAEIRDPERG--GARVWLGTFDTAQEAARAYDRAAFAQRG 58
              69*****999.**********8333..4***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.0E-13758IPR001471AP2/ERF domain
CDDcd000181.15E-26766No hitNo description
SMARTSM003803.8E-31872IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-30866IPR001471AP2/ERF domain
SuperFamilySSF541715.69E-23866IPR016177DNA-binding domain
PROSITE profilePS5103223.459866IPR001471AP2/ERF domain
PRINTSPR003672.6E-11920IPR001471AP2/ERF domain
PRINTSPR003672.6E-113248IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MEDDKKTKYR GVRTRPWGKF AAEIRDPERG GARVWLGTFD TAQEAARAYD RAAFAQRGAT  60
AVLNFPGEAG GPSGSSSSAP ARSGAGTGSG RGGTEKIELE YLDDSLLDEL LDDSKYGGK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-29810614114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177807.11e-79ethylene-responsive transcription factor ERF095-like
SwissprotQ9LTC52e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A3B5ZTD83e-78A0A3B5ZTD8_WHEAT; Uncharacterized protein
TrEMBLA0A452YBG13e-78A0A452YBG1_AEGTS; Uncharacterized protein
TrEMBLN1R0D53e-78N1R0D5_AEGTA; Ethylene-responsive transcription factor ERF098
STRINGEMT176045e-79(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-21ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]