PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT17327
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 201aa    MW: 21625.5 Da    PI: 8.6341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT17327genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.63.6e-1460109355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + GVr ++ +gr++AeIrd s++g  +r++lg+f tae Aa a+ +a+++ +g
  EMT17327  60 FIGVRARP-WGRFAAEIRD-STRG-GARVWLGTFATAEAAAMAYNKAALSSRG 109
               78******.**********.3433.4*********************997665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.55E-1858118IPR016177DNA-binding domain
SMARTSM003804.6E-2259123IPR001471AP2/ERF domain
PROSITE profilePS5103219.55959117IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-2360118IPR001471AP2/ERF domain
PRINTSPR003676.8E-86071IPR001471AP2/ERF domain
PfamPF008473.4E-960108IPR001471AP2/ERF domain
PRINTSPR003676.8E-88399IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MDNHGDMCYY SGGGMGAAAD PSCSSTSLSS IDSFLSDLSG GEMIDEEIRS QPKRPAASAF  60
IGVRARPWGR FAAEIRDSTR GGARVWLGTF ATAEAAAMAY NKAALSSRGA ATALDFPLER  120
VQESLQALGT TMTGIGGSPV LALKWRHSKR RRRSKAEIAK DAATCVRRSK VIAKQQQFIV  180
ELEDIGVDYL DELLRITCNT T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-2060118361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-2060118664ATERF1
3gcc_A4e-2060118664ATERF1
5wx9_A1e-19601191574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020192655.11e-146ethylene-responsive transcription factor 1B-like
TrEMBLA0A3B6D5I41e-145A0A3B6D5I4_WHEAT; Uncharacterized protein
TrEMBLN1QZX91e-145N1QZX9_AEGTA; Ethylene-responsive transcription factor 1B
STRINGEMT173271e-146(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-27ethylene response factor 1