PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT17147
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 190aa    MW: 20868.4 Da    PI: 11.2675
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT17147genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.9e-18110158355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                +GVr+++ +g+++AeIrdp     +  +r++lg+f taeeA+  ++ a ++l+g
  EMT17147 110 LRGVRRRP-WGKYAAEIRDP-----KlgRRVWLGTFNTAEEAKSVYDSAVLRLRG 158
               59******.**********9.....445*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.534109166IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-24109164IPR001471AP2/ERF domain
SMARTSM003803.4E-27109172IPR001471AP2/ERF domain
PRINTSPR003672.5E-8110121IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-17110164IPR016177DNA-binding domain
PfamPF008472.3E-10111158IPR001471AP2/ERF domain
CDDcd000187.62E-23111168No hitNo description
PRINTSPR003672.5E-8132148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MDGCWRLPRG PRGGAARVRA RARGRDADAT DDSDEETNQP QRRGARRCVR EIGLPRAFSR  60
LPSAAGGAVS SSSHWTRDKR LRAAAAGKKR TLVACGGDDW SAGTWSARQL RGVRRRPWGK  120
YAAEIRDPKL GRRVWLGTFN TAEEAKSVYD SAVLRLRGPS AVINSRWDPS ADFVELADLD  180
DLFAPEPLAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-181091641470Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3588681e-131AK358868.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1084K24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172264.11e-89pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLN1QZP71e-130N1QZP7_AEGTA; Ethylene-responsive transcription factor CRF4
STRINGEMT171471e-130(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.18e-22cytokinin response factor 3