PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16686
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 429aa    MW: 47177.1 Da    PI: 9.2405
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16686genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573828.5e-2623115997
    DUF573   9 eeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 
               +e e+++L+G+++f++++g+   +++ d+  fye +++++sf++sk+ql+eK+rrLKkK++ + ++ a++g  ++f++ h+  i+++++ iW+
  EMT16686  23 QEEELLILRGFLEFTSRRGTafASHQyDTGPFYEEIRRKLSFDFSKNQLIEKLRRLKKKYRVCATRmAAQGAAFAFKSVHEGAIYDVARHIWR 115
               689****************99877778**************************************9889***********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.3E-2323114IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MAVLNLPLKS KGYIKLGIKT QGQEEELLIL RGFLEFTSRR GTAFASHQYD TGPFYEEIRR  60
KLSFDFSKNQ LIEKLRRLKK KYRVCATRMA AQGAAFAFKS VHEGAIYDVA RHIWRSAFKR  120
DGVATTSTPQ KQQQSQQQAP PPRAAPRERR LAAREPAIAA FGSSVAVIAQ PPSVPAAPLP  180
PYPLTANGLT EADVRSILSP LLKELINSVA FPGQTGLGLG LGMGFGGADI LGVGLGVAGL  240
SPRVPGDEKW RQQQILELEV YLKRLELVRE QPVKEKEVRV SIHNPSTSNS TQIKRVASAP  300
YCRVDMPSRS NNKGLNLGVD WAITFLSGLG VQVQVCYKPA RLHFYAVPKF SLRSLGVAYL  360
DCLECQWACW WKSPTSGAPV LPINGALLEF AGEEEEEVTG EVLAYIAGEE EEVAGEEFTG  420
ASERRKEEP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3738131e-135AK373813.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3044F12.
GenBankAK3764051e-135AK376405.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3123A01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003566363.12e-82probable transcription factor At5g28040
TrEMBLN1R1R10.0N1R1R1_AEGTA; Uncharacterized protein
STRINGEMT166860.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.25e-24DNA-binding storekeeper protein-related transcriptional regulator