PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16477
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 226aa    MW: 25355.1 Da    PI: 5.0056
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16477genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.1e-1648102155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 
               + y+GVr++ + g+Wv+e+r+p   g ++  r++lg+f +a++Aa+a++ a+++l g
  EMT16477  48 PVYRGVRRRGREGQWVCELRVPA--GsRSySRIWLGTFASAQMAARAHDSAALALSG 102
               68*******************84..55456***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.0E-1248102IPR001471AP2/ERF domain
PROSITE profilePS5103220.70549110IPR001471AP2/ERF domain
SMARTSM003801.9E-1849116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.1E-2549112IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-1649112IPR016177DNA-binding domain
CDDcd000186.75E-1662112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MDTIAAWPQF DGQEYRTVWP EEQEYRTVWS EPPKRRAGRN KLQETRHPVY RGVRRRGREG  60
QWVCELRVPA GSRSYSRIWL GTFASAQMAA RAHDSAALAL SGRDACLNFA DSAWRMMPVH  120
AAGSFKLAAA QEIKDAVAVA LKEFQEQQRP ADESTAPSST AEESALSIIP SDLSGLDNEH  180
WIGGMEAGSY YASLAQGMLM EPPADGASWR EDREHDDGFD TWLWSY
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress. {ECO:0000269|PubMed:16284406}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold stress. {ECO:0000269|PubMed:12609047}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF7584890.0JF758489.1 Triticum aestivum clone 246G5 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167747.11e-166dehydration-responsive element-binding protein 1B-like
SwissprotQ3T5N42e-47DRE1B_ORYSJ; Dehydration-responsive element-binding protein 1B
TrEMBLA0A453LDE31e-164A0A453LDE3_AEGTS; Uncharacterized protein
TrEMBLF5CPR11e-165F5CPR1_WHEAT; CBFIVa-2.3
TrEMBLN1QZE91e-165N1QZE9_AEGTA; Dehydration-responsive element-binding protein 1B
STRINGEMT164771e-166(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.13e-27C-repeat/DRE binding factor 2