PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15564
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 110aa    MW: 12139.7 Da    PI: 8.2913
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15564genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000162848323
              ETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
              C +C++ F+++  L  H++ H
  EMT15564 28 CVYCHRKFRTSQALGGHQNAH 48
              ******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.11E-62552No hitNo description
PROSITE profilePS5015710.8872653IPR007087Zinc finger, C2H2
PROSITE patternPS0002802848IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
MEHAHDELSL ELTLATAVVA PAPGFFLCVY CHRKFRTSQA LGGHQNAHKE ERADKLRRKT  60
AAATAHAWKP ERTAAAVWVS EEPIAAGGMA HKRSTSSSER DHELDLSLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152485.12e-75uncharacterized protein LOC109737768
TrEMBLA0A453TA254e-74A0A453TA25_AEGTS; Uncharacterized protein
TrEMBLR7WBD14e-74R7WBD1_AEGTA; Zinc finger protein KNUCKLES
STRINGEMT155646e-75(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.11e-11C2H2 family protein