PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15563
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 120aa    MW: 12934.4 Da    PI: 8.2398
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15563genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000123454323
              ETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
              C +C++ F+++  L  H+++H
  EMT15563 34 CVYCDRKFRSSQALGGHQNVH 54
              *******************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.91E-92868No hitNo description
PROSITE profilePS5015711.3443259IPR007087Zinc finger, C2H2
PROSITE patternPS0002803456IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MDRASRAQED ELSLELSLAA VAPAPGTSDG FFLCVYCDRK FRSSQALGGH QNVHKHERAV  60
AWRMREVAAA AVTRALDVVS SRKAGKATSY SVRKPEDPSG SNEGGSSSER GEQVDLSLRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152481.15e-83zinc finger protein 2-like
TrEMBLR7W5Q11e-81R7W5Q1_AEGTA; Zinc finger protein 4
STRINGEMT155632e-82(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.14e-12zinc finger protein 2