PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15483
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 410aa    MW: 44036.3 Da    PI: 4.4478
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15483genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-1952101255
       AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  EMT15483  52 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 101
               789******.7*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.52E-3051108No hitNo description
SMARTSM003801.5E-3352115IPR001471AP2/ERF domain
PROSITE profilePS5103219.55952109IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-1952109IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.3E-2752108IPR001471AP2/ERF domain
PfamPF008471.0E-1352101IPR001471AP2/ERF domain
PRINTSPR003676.0E-85364IPR001471AP2/ERF domain
PRINTSPR003676.0E-87591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MAMKRKLSPT EADLDSDDHH KPDTSSITTA TRPEPWAATV GAVATAQPAR KRFVGVRQRP  60
SGRWVAEIKD TIQKIRVWLG TFDTAEEAAR AYDEAACLLR GANTRTNFWP RAAAPAATSD  120
GHGGAGLAEN HGHLHHHTPP PSALPSKVTN LLLLRLKRAR SISDEHISAS ATAQEALGQQ  180
QQEQEEYGAG SFHVDDFLSY DSNVDEHGVV KYEEDSHCSR DAEDDEEDVS VEEEEAPLDF  240
GFMDTHPSPP GDVGDAGLFS PFEMMAAEIG GAVEAEAEAP EYGGGENENS AAIHEVMKRM  300
TYERKISASL YALSGVSECL RLRLGDVGHG LALSGLRDAC MKKRQEQNQE AVVDCVEGGH  360
EESSSSNSSS SSEVASCSPE AGISSPNADA VDSDVVMWSS LDLAPICFMS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126201e-76CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177393.10.0uncharacterized protein LOC109762920
TrEMBLA0A3B6JEP70.0A0A3B6JEP7_WHEAT; Uncharacterized protein
TrEMBLR7W5K60.0R7W5K6_AEGTA; Ethylene-responsive transcription factor RAP2-11
STRINGEMT154830.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54823052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-22related to AP2 11