PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT11952
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 128aa    MW: 14306.6 Da    PI: 6.9735
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT11952genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-171364155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              ++y+GVr+++ +g+++AeIrd s    +  r +lg+f+ aeeAa+a+++ + +++g
  EMT11952 13 TKYRGVRRRP-WGKFAAEIRDSSR---HgVRMWLGTFDPAEEAAAAYDRSAYSMRG 64
              69********.**********432...25*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.02E-261373No hitNo description
PfamPF008471.4E-111364IPR001471AP2/ERF domain
SMARTSM003802.0E-301480IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-291473IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-221473IPR016177DNA-binding domain
PROSITE profilePS5103222.9721472IPR001471AP2/ERF domain
PRINTSPR003673.0E-101526IPR001471AP2/ERF domain
PRINTSPR003673.0E-103854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MEGGEGSGGG EPTKYRGVRR RPWGKFAAEI RDSSRHGVRM WLGTFDPAEE AAAAYDRSAY  60
SMRGRNAVLN FPDRAHVYEA EARRQGQGSS SSARQQNQQQ GQSGVIEFEY LDDDVLQSML  120
HDHDKSNK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-3321283127Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0090601e-171BT009060.1 Triticum aestivum clone wdr1f.pk003.l5:fis, full insert mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199104.11e-89ethylene-responsive transcription factor 14-like
SwissprotQ9LSX01e-32ERF96_ARATH; Ethylene-responsive transcription factor ERF096
SwissprotQ9LTC51e-32ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLM8B5D23e-89M8B5D2_AEGTA; Ethylene-responsive transcription factor ERF098
STRINGEMT119525e-90(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.11e-28ERF family protein
Publications ? help Back to Top
  1. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]
  2. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]