PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT11307
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 246aa    MW: 26524.6 Da    PI: 6.8636
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT11307genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.53e-1798147355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++GVr ++ +g+++AeIrd + ng   r++lg+f+++e Aa a+++a+ +++g
  EMT11307  98 FRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSPEAAALAYDQAAFAIRG 147
               8*******.**********44465..***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-2797155IPR001471AP2/ERF domain
PROSITE profilePS5103222.10297155IPR001471AP2/ERF domain
SMARTSM003808.5E-3397161IPR001471AP2/ERF domain
PRINTSPR003673.7E-998109IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2198156IPR016177DNA-binding domain
PfamPF008475.5E-1298147IPR001471AP2/ERF domain
CDDcd000182.81E-1698154No hitNo description
PRINTSPR003673.7E-9121137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0009873Biological Processethylene-activated signaling pathway
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MTTQRNHHRA AAEEFPLHSP GSSTGSADSA PWHHRAPATP PPVLPFDTSD ADEMLLLNML  60
SQHREVQQAA AAAAPTTAPV NQEADEEDKV ALGVDRAFRG VRKRPWGKFA AEIRDSTRNG  120
VRVWLGTFDS PEAAALAYDQ AAFAIRGGAA VLNFSADQVR RSLEGAADDV CGRAHGVSPV  180
LALKRRHSMR SRKATAVSKK ARAARGQPEG VVMELEDLGA EYLEQLLGAS EDTASMSSWC  240
WSHHSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-23981541571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00374DAPTransfer from AT3G23240Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF5839400.0EF583940.1 Triticum aestivum pathogen-inducible ethylene-responsive element-binding protein (PIEP1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158423.11e-180ethylene-responsive transcription factor 1B-like
TrEMBLA0A453MJJ81e-179A0A453MJJ8_AEGTS; Uncharacterized protein
TrEMBLM8B3L31e-179M8B3L3_AEGTA; Ethylene-responsive transcription factor 1B
STRINGEMT113071e-180(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-43ethylene response factor 1