PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09265
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 185aa    MW: 20236.7 Da    PI: 4.5986
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09265genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-181666256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +y+GVr +k +g+Wv+eIr+p   gk++r++lg+f ++e+Aa a++ a+++l+g+
  EMT09265 16 QYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESPEMAAVAHDVAALRLRGH 66
              69****999.**********8...557**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.4E-311673IPR001471AP2/ERF domain
PROSITE profilePS5103223.1171673IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-221673IPR016177DNA-binding domain
SMARTSM003804.6E-351679IPR001471AP2/ERF domain
CDDcd000188.77E-301673No hitNo description
PfamPF008472.1E-121666IPR001471AP2/ERF domain
PRINTSPR003674.0E-121728IPR001471AP2/ERF domain
PRINTSPR003674.0E-125575IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MEVVPDNAAG VAAAEQYRGV RKRKWGKWVS EIREPGKKTR IWLGSFESPE MAAVAHDVAA  60
LRLRGHEARL NFPGLAHLFR RPDTAEPDDV RAAALEAAAQ VRFRPDLVLQ PGGCGSSGGG  120
GFPDRLDDVA CNALLRSDDL EPESPNMWAE LAEAMLLAPP VWEGSAVDND EWSQGSLWDP  180
SCWSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-171273163ATERF1
3gcc_A3e-171273163ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7275111e-81KJ727511.1 Zea mays clone pUT5370 AP2-EREBP transcription factor (EREB106) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020194566.11e-130ethylene-responsive transcription factor ERF022-like
SwissprotQ9C9I22e-33ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLM8B6P71e-130M8B6P7_AEGTA; Ethylene-responsive transcription factor ERF021
STRINGEMT092651e-131(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.13e-34ERF family protein