PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09007
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 335aa    MW: 36504.5 Da    PI: 7.4937
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09007genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-2073122255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+G+r+++ +g+W+AeIrdps+     r++lg+++taeeAa+a++a ++k++g
  EMT09007  73 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYDTAEEAARAYDAEARKIRG 122
               69*******.**********965...4*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-3273131IPR001471AP2/ERF domain
PROSITE profilePS5103224.18473130IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-2273131IPR016177DNA-binding domain
CDDcd000181.60E-3373132No hitNo description
SMARTSM003805.5E-3973136IPR001471AP2/ERF domain
PRINTSPR003679.6E-127485IPR001471AP2/ERF domain
PfamPF008471.8E-1274122IPR001471AP2/ERF domain
PRINTSPR003679.6E-1296112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MRAGARLATT LGSPMAPLWP TFGILASSLP KDFLFPIQVI LLGCITKYKN FIVDAVQHDG  60
PAAKQVKRVR KNQYRGIRQR PWGKWAAEIR DPSKGVRVWL GTYDTAEEAA RAYDAEARKI  120
RGKKAKVNFP EDAPTVQKST LKPTAAKSAK LAPPPKACED EPFNHLSRGD NDLFAMFAFN  180
DKKVPAKPAE SVDSLLPVKP LVPTETFGMN MLSDQSSNSF GSTDFGWDDE VMTPDYTSVF  240
VPNAAAMPAY GEPAYLQGGA PKRMRNNFGV AVLPQGNVAQ DIPAFDHEMK YSLPYVESSS  300
DGSMDSLLLN GAMQDGASSG DLWSLDELFM AAGGY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-2072130160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-2073130563ATERF1
3gcc_A4e-2073130563ATERF1
5wx9_A9e-20731321474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN6811910.0JN681191.1 Triticum aestivum ethylene responsive transcription factor 5a (ERF5a) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020194933.10.0ethylene-responsive transcription factor 1-like
TrEMBLM8AX120.0M8AX12_AEGTA; Ethylene-responsive transcription factor 1
STRINGEMT090070.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112003142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.35e-28related to AP2 12