PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08027
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 189aa    MW: 20424.6 Da    PI: 4.436
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08027genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-183988255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  EMT08027 39 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLRG 88
              69****998.**********9...336*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.1E-3539102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-303996IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-203997IPR016177DNA-binding domain
PROSITE profilePS5103221.7733996IPR001471AP2/ERF domain
CDDcd000185.67E-184098No hitNo description
PfamPF008471.3E-114088IPR001471AP2/ERF domain
PRINTSPR003674.0E-94051IPR001471AP2/ERF domain
PRINTSPR003674.0E-96278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MVKSAQQQQQ VALGGDVGNA VAARQGGGGG GGRQQQQQQY KGVRMRSWGS WVSEIRAPNQ  60
KTRIWLGSYS TAEAAARAYD AALLCLRGSA ADLNFPVHLP FHVPAAAIVA QDQSARHSNA  120
DDDETMAHGD DGVDYDALAD IDAFFQSPKC MDYATMMDPC STFFAPAPMA PVEWEEEGEI  180
SLWSFSSYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-152996472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3770121e-141AK377012.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3145K04.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020174332.11e-103ethylene-responsive transcription factor ERF014-like
TrEMBLM8AU681e-138M8AU68_AEGTA; Ethylene-responsive transcription factor ERF012
STRINGEMT080271e-138(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-25ERF family protein