PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT07419
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 225aa    MW: 24230.9 Da    PI: 4.1182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT07419genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.24.1e-0831572955
       AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
               r++lg++ +aeeAa+a++  + +++g
  EMT07419 31 VRVWLGTYNSAEEAARAYDVEAHRIRG 57
              79*********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.959865IPR001471AP2/ERF domain
SMARTSM003803.4E-111271IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-112866IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.9E-162967IPR001471AP2/ERF domain
CDDcd000183.70E-162966No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MCSAATATDD GLLKGRERTS SGGSAAALTG VRVWLGTYNS AEEAARAYDV EAHRIRGKKA  60
KVNFPEEAPM APQQRCATSA KVPEFNTEQK PPQNMSFVPT VNAVEAPFMN FSSDQGSNSF  120
SCSDFSWKND IKTPGITSVL ASIPTSTEVN ESTFLQNNGI NSTVPPVMGD ANVDLADLEP  180
YMKFLMDDGS EQSIDSILSC DVPQDVVGNM DLWSFDDMPL SAGFY
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ6898120.0KJ689812.1 Triticum turgidum subsp. durum ethylene response factor 1 (ERF1) gene, complete cds.
GenBankKJ6898130.0KJ689813.1 Triticum turgidum subsp. durum ethylene response factor 1 short form P (ERF1) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183034.11e-130ethylene-responsive transcription factor 1-like
SwissprotQ6K7E64e-72ERF1_ORYSJ; Ethylene-responsive transcription factor 1
TrEMBLM8BKX71e-166M8BKX7_AEGTA; Ethylene-responsive transcription factor 1
STRINGEMT074191e-167(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.13e-18ERF family protein
Publications ? help Back to Top
  1. Kim CY, et al.
    Identification of rice blast fungal elicitor-responsive genes by differential display analysis.
    Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4
    [PMID:10755311]
  2. Koo SC, et al.
    OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33.
    Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70
    [PMID:19607808]
  3. Iwamoto M,Takano M
    Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
    Biotechnol. Lett., 2011. 33(1): p. 173-8
    [PMID:20872166]
  4. Serra TS, et al.
    OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors.
    Plant Mol. Biol., 2013. 82(4-5): p. 439-55
    [PMID:23703395]
  5. Jisha V, et al.
    Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice.
    PLoS ONE, 2015. 10(6): p. e0127831
    [PMID:26035591]
  6. Lourenço TF, et al.
    The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors.
    Plant Physiol., 2015. 169(3): p. 2275-87
    [PMID:26381316]