PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05789
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 279aa    MW: 29897.5 Da    PI: 7.6738
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05789genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18109160256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr+++ +g+++AeIrd +    r +r++lg+f ta+eAa a++ a+++++g+
  EMT05789 109 SYRGVRRRP-WGKFAAEIRDTRR---RgARVWLGTFATADEAALAYDVAALRMRGP 160
               69*******.**********433...24**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.92E-27108168No hitNo description
PROSITE profilePS5103223.538109167IPR001471AP2/ERF domain
SMARTSM003804.3E-35109173IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-22109168IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-30109168IPR001471AP2/ERF domain
PfamPF008471.8E-14109159IPR001471AP2/ERF domain
PRINTSPR003672.7E-10110121IPR001471AP2/ERF domain
PRINTSPR003672.7E-10133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006457Biological Processprotein folding
GO:0009408Biological Processresponse to heat
GO:0009644Biological Processresponse to high light intensity
GO:0010200Biological Processresponse to chitin
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAIGAPRDTS NILEDVWATI MTETPSGCTP MPASSTSFVD QAGAEILQRL PSLGGGISMG  60
ADEWGELLSV ADAATPPVAE QPPLAAASPR GGEGQQSAAA GSKAALPKSY RGVRRRPWGK  120
FAAEIRDTRR RGARVWLGTF ATADEAALAY DVAALRMRGP RAHLNFPIEK VQRRLDLERD  180
NGQFLDAADH PTGRARRKRR RRSSATATDH ARTVDADVTA AYGGSDQMVS FTNSGRGHGT  240
PAVQDRRVMS ADVGGAVDRV IELEEIGGEY WDYLFPPVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-25108168464ATERF1
3gcc_A3e-25108168464ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195201RRKRRRR
2196200RKRRR
3196202RKRRRRS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7277102e-56KJ727710.1 Zea mays clone pUT5649 AP2-EREBP transcription factor (EREB165) gene, partial cds.
GenBankKU6854122e-56KU685412.1 Saccharum spontaneum clone SES23E05, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169227.10.0ethylene-responsive transcription factor ERF094-like
TrEMBLM8AWK40.0M8AWK4_AEGTA; Ethylene-responsive transcription factor ERF091
STRINGEMT057890.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116162736
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-20ethylene response factor 1