PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT04957
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 292aa    MW: 31612.9 Da    PI: 7.5601
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT04957genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-16108156455
       AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                GVr ++ +g+++AeIrd + ng  +r++lg+f+t++ Aa a+++a+ + +g
  EMT04957 108 IGVRKRP-WGKYAAEIRDSTRNG--ARVWLGTFDTPQAAALAYDQAAFSVRG 156
               6******.**********44465..**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.087106164IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-21107166IPR016177DNA-binding domain
PRINTSPR003672.4E-7107118IPR001471AP2/ERF domain
PfamPF008471.7E-11108156IPR001471AP2/ERF domain
SMARTSM003804.2E-31109170IPR001471AP2/ERF domain
CDDcd000183.61E-16109165No hitNo description
Gene3DG3DSA:3.30.730.104.8E-27109164IPR001471AP2/ERF domain
PRINTSPR003672.4E-7130146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MELNHLQMEL PTYDGFHCYH GYSISFSSNA HYTHHQPAPQ AQAHDDTGID HQLFSFSFPM  60
EATSTSFTTP PAASGAWEEI MTAPVASPSL LPQGSSSSSR DTPDSPLIGV RKRPWGKYAA  120
EIRDSTRNGA RVWLGTFDTP QAAALAYDQA AFSVRGPAAV LNFPVKLVQE SLRTLDIGCA  180
AAGDSPALAL KRRHCIRKRR PNKKRMSRAT ATAAQATRQE AATTSSLSTC VLELEDLGAD  240
YLDELLPLCV VFGSFLGLLA NTVGCTKIKV KSGSVETFPM SFMIIVIESA MK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-251091641772Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175241.11e-178ethylene-responsive transcription factor ERF094-like
TrEMBLM8BPP90.0M8BPP9_AEGTA; Ethylene-responsive transcription factor 15
STRINGEMT049570.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06160.15e-34octadecanoid-responsive Arabidopsis AP2/ERF 59