PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT04507
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 242aa    MW: 26082.4 Da    PI: 8.3647
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT04507genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.001891114123
               EEETTTT.EEESSHHHHHHHHHHT CS
   zf-C2H2   1 ykCpdCg.ksFsrksnLkrHirtH 23 
               ++C  Cg k+Fs   +L++H + +
  EMT04507  91 HVCRRCGvKRFSVLADLRTHEKHC 114
               79******************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MASLSWRKAV PQGPGEEPIT DRRGHGDQYK APGALARPGS PAPGAGTGRR FFYSCPYAGC  60
KRNREHRDFQ PLKTPVCVKN HYRRSHCDKS HVCRRCGVKR FSVLADLRTH EKHCGRDRWV  120
CSCGVSFSRK DKLFAHVAIF DGGHTPALPP SDDEAIGHCT AATAIDSILV PSSGQPLPVS  180
GGEAVNVVDQ SFSGQMLDGL SFSGAKGGMD DGRAKLSSPI GIDFCDFDGF DLLGAVAMDF  240
NF
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in aluminum tolerance. {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3667080.0AK366708.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2046B02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020188988.11e-160zinc finger protein STAR3-like
SwissprotQ943I64e-61STOP1_ORYSJ; Zinc finger protein STOP1 homolog
TrEMBLM8BND21e-177M8BND2_AEGTA; Uncharacterized protein
STRINGEMT045071e-178(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP151238111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.32e-58C2H2 family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]