PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT04360
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 117aa    MW: 12702.1 Da    PI: 8.9287
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT04360genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.5e-052547123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              + C +C++sF+++  L  H++ H
  EMT04360 25 FACCYCPRSFRSSQALGGHQNAH 47
              78******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.56E-62353No hitNo description
PfamPF139121.5E-52448IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.4062552IPR007087Zinc finger, C2H2
PROSITE patternPS0002802747IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
METEEGLDLS LSLRQYTPPW SQLVFACCYC PRSFRSSQAL GGHQNAHRPA RPRRATALSS  60
AAAAGELGKA AVDHHRSAWP RPGAHAWRAG HSQQASSGTR RGDQELADEA IDLSLKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178987.16e-42zinc finger protein 2-like
TrEMBLA0A453JAR46e-79A0A453JAR4_AEGTS; Uncharacterized protein
TrEMBLM8ARK76e-79M8ARK7_AEGTA; Uncharacterized protein
STRINGEMT043609e-80(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69922646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-07zinc finger protein 4