PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT04052
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family AP2
Protein Properties Length: 689aa    MW: 73256.3 Da    PI: 5.9888
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT04052genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.31.2e-10279335155
       AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV++++++gr++A+++d  +     ++ k  + g ++ +++Aa+a++ a++k++g
  EMT04052 279 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 335
               57*******************5444.2455535555.7799999*************98 PP

2AP241.82.7e-13378433155
       AP2   1 sgykGV....rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               s+y+GV    +++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  EMT04052 378 SKYRGVtryvTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 433
               688888888899**********988532...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.38E-14279345IPR016177DNA-binding domain
PfamPF008473.7E-8279335IPR001471AP2/ERF domain
CDDcd000181.15E-16279345No hitNo description
Gene3DG3DSA:3.30.730.105.3E-11280343IPR001471AP2/ERF domain
PROSITE profilePS5103217.108280343IPR001471AP2/ERF domain
SMARTSM003801.3E-21280349IPR001471AP2/ERF domain
PRINTSPR003673.6E-6281292IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-15378443IPR016177DNA-binding domain
CDDcd000183.33E-22378443No hitNo description
PfamPF008471.3E-7378433IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-16379442IPR001471AP2/ERF domain
SMARTSM003801.3E-29379447IPR001471AP2/ERF domain
PROSITE profilePS5103219.151379441IPR001471AP2/ERF domain
PRINTSPR003673.6E-6423443IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    Send to blast
MASGNDWLGF SLSGQENPQP HQDSPPPAGI DISGASDFYG VPTQPAPDAQ LGVPGHQPSY  60
GITEDFNRGA HETHDWNMRG DLDYNGGASE LSMLVGSSAV GGKRAAMEAE TEPKLEDFLG  120
CNSFVSEQDQ AGGFLFSGVP MTTSSNSNTG SNTMELSMIK SWLRDNQLPQ APHPQSQTGA  180
PAQQPQPHEE MGTDASSFDP RGRNGALVGA GSSQSLALSM STGSGSHLPM AVVSGSASGG  240
VSESTSSENK RASGAMDSPG GAVEAVARKS IDTFGQRTSI YRGVTRHRWT GRYEAHLWDN  300
SCRREGQSRK GRQGGYDKED KAARAYDLAA LKYWGTTTTT NFPINTYEKE VDEMKHMTRQ  360
EYIAYLRRNS SGFSRGASKY RGVTRYVTRH HQHGRWQARI GRVAGNKDLY LGTFSTEEEA  420
AEAYDIAAIK FRGLNAVTNF DMSRYDVKTI LESSTLPVGG AARRLKEAAD HPEAGATIWR  480
AGMDGAIISQ LTDVGMGAPE AGATIWRAGM DGAIISQLTD VGMGAYASYH HGGPPTAFQQ  540
PSPLSVHYPY VAQPPRGWCK PEQDATVATQ SLQDLQQLHL GTAAHNYFQA SSSSTVYNGG  600
GVGGYQQGTG GNAFLMPAST VVDEQGHSST AANQGSTCSY GDEEGKLNLG YDAMAMASTG  660
ADPYAAASTV SIARANGYSN NWSSPFSGM
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes cell proliferation, differentiation and morphogenesis, especially during embryogenesis. {ECO:0000269|PubMed:12172019}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183326.10.0AP2-like ethylene-responsive transcription factor PLT2
SwissprotQ8LSN21e-124BBM2_BRANA; AP2-like ethylene-responsive transcription factor BBM2
TrEMBLM8BM060.0M8BM06_AEGTA; AP2-like ethylene-responsive transcription factor BBM2
STRINGEMT040520.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP156937110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-113AP2 family protein