PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03622
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family G2-like
Protein Properties Length: 186aa    MW: 20452.3 Da    PI: 5.4812
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03622genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.13.8e-084332855
   G2-like 28 tPktilelmkvkgL..tlehvkSHLQkYRl 55
              tP +i+e+++++g+  t ++v SHLQkYR 
  EMT03622  4 TPNNIREFLEIDGIyvTTAQVSSHLQKYRK 33
              9************65599***********5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.1E-5434IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MDDTPNNIRE FLEIDGIYVT TAQVSSHLQK YRKDCRTGGL SIMPSSMPSH SNSTSKNNLE  60
SQESGGSYRF HMRSQEARDI NQTSWLSGGA SQVDYGVLGN GNQTTNLGSG AAYGHGYHHG  120
NGIGDINGYD HHYGTVSAND YVKGEIDCTK SCCISEIGVK SKPEDGDLVT NMEAYWMQPA  180
RDYYQF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3765251e-150AK376525.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3126L22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLR7W5C51e-139R7W5C5_AEGTA; Uncharacterized protein
STRINGMLOC_68340.14e-51(Hordeum vulgare)