PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03495
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family G2-like
Protein Properties Length: 249aa    MW: 27477.2 Da    PI: 7.2214
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03495genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like955.6e-301871255
   G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
              pr+rWt+eLH++F+eav+ LGG+++AtPk+il+lm+ kg++++hvkSHLQ+YR+
  EMT03495 18 PRMRWTEELHRQFIEAVDCLGGQDEATPKRILQLMGAKGVSISHVKSHLQMYRS 71
              9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.9E-281473IPR009057Homeodomain-like
PROSITE profilePS5129412.7441474IPR017930Myb domain
SuperFamilySSF466893.4E-161673IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-231871IPR006447Myb domain, plants
PfamPF002491.8E-81970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MRGFERRGVR QYNRSDEPRM RWTEELHRQF IEAVDCLGGQ DEATPKRILQ LMGAKGVSIS  60
HVKSHLQMYR SSSSNTTFNG PPNASVDRRR DHCVVDGPQN GHRNGNDMGA ASERIDDDSS  120
YIVPPRGHRS PPAYQIPSIE EVFRSWEQSR GRLPWNSSMP SEKATGWACH ADRSTRQKQQ  180
QAAGCDLTLS IGRWEAEAAS SDADVSSTTT EEAVAPARDR GAGGHRRSAS ATGLDLDLNL  240
DLAISSSCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A7e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-171972356Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3716056e-84AK371605.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2138C08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178889.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A453SY830.0A0A453SY83_AEGTS; Uncharacterized protein
TrEMBLR7W1U50.0R7W1U5_AEGTA; Putative Myb family transcription factor
STRINGEMT034950.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54933758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.13e-25G2-like family protein