PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03074
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GRAS
Protein Properties Length: 664aa    MW: 74415.9 Da    PI: 5.7275
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03074genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS311.61.7e-952756582373
      GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102
               ++lL++cAeavss+d + a++lL+r++ ++sp+gd+ qRla+yf+++L+arla+++s+ly+al  ++t    ++e ++a++l   ++  +k++ l a ++I
  EMT03074 275 ETLLIRCAEAVSSNDVHGASKLLERIKWHSSPTGDAKQRLAHYFAQGLEARLAGTGSRLYRALMGKHTL---TIELIKAFHLHMAACCSMKVGLLFAINTI 372
               789************************************************************999998...8**************************** PP

      GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEa 201
                +av+g +++Hi+ ++i+ G+QWp Ll+ La+R++gpp++RiTg++ p++g   ++ +ee g+rL++ A+++gvpfef++ +a++led++ e+L+++p+E+
  EMT03074 373 CKAVAGRRKLHIVHYGITTGFQWPDLLRLLANREGGPPQVRITGINTPRPGlrPAQIMEEAGDRLNNCARQFGVPFEFRA-IASKLEDVRAEDLHIDPDEV 472
               **************************************************9*99**************************.7******************* PP

      GRAS 202 laVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvac 300
               l+Vn+ ++  +l+des++ +   +rd vL+ v +++P v+v +  +  ++++ F++rf +al+y++alfd +e+++pr++++r  vEr +++r++ n++ac
  EMT03074 473 LVVNSLYEFRTLMDESLTFDMvsPRDMVLNNVSKMRPAVFVQSLVNGPYSAAFFMTRFRHALYYFTALFDVMENTVPRDNDQRLLVERDIFARSAINMIAC 573
               ***************98765555****************************************************************************** PP

      GRAS 301 egaerrerhetlekWrerleeaGFkpvplsek............aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
               eg++r+er +++++W++r e+aG++++pl+ +            ++   k  ++  + + +++ e++ +l++gWk+r L++ S W
  EMT03074 574 EGTDRVERPQNYKEWQARNERAGLRQLPLDPEraglrqlpldpdVVLMLKDQVKSRYHKHFMISEDHCWLLQGWKGRVLYAHSTW 658
               ******************9999888777665411111111000055555555666666779999********************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098554.579248627IPR005202Transcription factor GRAS
PfamPF035145.9E-93275658IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 664 aa     Download sequence    Send to blast
MAATPEELLG LTEPAPLSPS IFLDLPPPPT THGDSQQPQN DLALEYISRM LTEEDIVDKF  60
FYQYPDHPEL LQAEQPFAEI LADTSSDAHE SFAASTSILM PSQGNGMDLM VSGCQVQYPA  120
FFLNGTGTGT GIMEPSGLVF PIPSESSTRT DMLSSMAFFK GMEEANRFLP ADNVMVAGRG  180
RKKRPGMDGE AEAGLGRSSK QITALPRCVQ EEEEEEEEEA TALEMLDRLV LNGYDAHPGE  240
MQEVVRVTLE DKENKAAIGR RGRRGARHTV VTDLETLLIR CAEAVSSNDV HGASKLLERI  300
KWHSSPTGDA KQRLAHYFAQ GLEARLAGTG SRLYRALMGK HTLTIELIKA FHLHMAACCS  360
MKVGLLFAIN TICKAVAGRR KLHIVHYGIT TGFQWPDLLR LLANREGGPP QVRITGINTP  420
RPGLRPAQIM EEAGDRLNNC ARQFGVPFEF RAIASKLEDV RAEDLHIDPD EVLVVNSLYE  480
FRTLMDESLT FDMVSPRDMV LNNVSKMRPA VFVQSLVNGP YSAAFFMTRF RHALYYFTAL  540
FDVMENTVPR DNDQRLLVER DIFARSAINM IACEGTDRVE RPQNYKEWQA RNERAGLRQL  600
PLDPERAGLR QLPLDPDVVL MLKDQVKSRY HKHFMISEDH CWLLQGWKGR VLYAHSTWAS  660
QVID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A3e-402786588374GRAS family transcription factor containing p
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3750620.0AK375062.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3084L15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003575608.30.0PREDICTED: scarecrow-like protein 33
TrEMBLR7W0J00.0R7W0J0_AEGTA; Uncharacterized protein
STRINGBRADI4G09155.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23131297
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-123GRAS family protein