PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT02903
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 430aa    MW: 45464.8 Da    PI: 8.0543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT02903genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.2e-053153521254
               HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               R +++ +++  L++l+ +      +K + a++L +++eYIk L
  EMT02903 315 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 352
               677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.227303352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-7313361IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.27E-5313355No hitNo description
SuperFamilySSF474591.02E-10313371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MHNGGGGGGA VSHGMWWNTN TTAVPAAACS TELAGFNAWP AAQLAAGGGY DMAVADGGKA  60
KSCTTTASSE SPRNNRSLTF QETASISDPA AGFTDWNTPY MSNGGAGNMH GFLQVGHHDM  120
SSRTDQQSHM NASSLMNDPS PNNLDLALQA PPPQQHQQAD DPHRQQQLLS SLGAPELLLS  180
PNSPYGFQSS SLLRSLLEPM AKPAPAAGIQ QYQYQQMGGQ AGVREPLHFT NDAAFWNPSA  240
GFGMAMPAPA VSEQTSARAV KRPSPAPRGA NLALKSVLEG VGDSSSIVTK KANSEPAFKK  300
PRTETPSSLP TFKVRKEKLG DRITALQQLV SPFGKTDTAS VLHETIEYIK FLHDQAGVLS  360
APYLKRGHHQ HQVPQYLKSS SVSPDKSCKD GGGEVSLKGR GLCLVPISST FAVASDGPVD  420
FWTPFGGQFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3695050.0AK369505.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2092J07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190605.10.0transcription factor bHLH112-like isoform X1
TrEMBLN1QRM00.0N1QRM0_AEGTA; Transcription factor bHLH112
STRINGEMT029030.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.34e-46bHLH family protein