PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT02052
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 212aa    MW: 22797.7 Da    PI: 11.2167
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT02052genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.4e-1668116455
       AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                GVr ++ +g+++AeIrd + ng  +r++lg+f+t+  Aa a+++a+ + +g
  EMT02052  68 IGVRKRP-WGKYAAEIRDSTRNG--ARVWLGTFDTPHAAALAYDQAAFSVRG 116
               6******.**********44465..**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.99566124IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2067125IPR016177DNA-binding domain
PRINTSPR003674.8E-106778IPR001471AP2/ERF domain
PfamPF008472.3E-1168116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-2769124IPR001471AP2/ERF domain
SMARTSM003801.0E-3069130IPR001471AP2/ERF domain
CDDcd000181.84E-1569124No hitNo description
PRINTSPR003674.8E-10106126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MEVDHQRLSF LMEATSITSN DGSPPASAGD AGDHSAGCEF MGTPVAWPAL EPQGSSSGSR  60
SAPDSPLIGV RKRPWGKYAA EIRDSTRNGA RVWLGTFDTP HAAALAYDQA AFSVRGPAAV  120
LNFPLTGVQQ CLGALGQPAG TRLLWRSSAG TASGREIPRT RGGRAGRRRH RGPTLHRHCQ  180
HKPRKTKKNE GGIRMVELIA NEVFKAPHGW RF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-24691241772Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166253.16e-79ethylene-responsive transcription factor ERF094-like
TrEMBLR7W3B81e-153R7W3B8_AEGTA; Uncharacterized protein
STRINGEMT020521e-154(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-29ethylene response factor 1