PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.WV14F
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 342aa    MW: 39417.7 Da    PI: 8.7992
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.WV14FgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.28.2e-50101383128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 
                  pGfrFhPtdeelv++yLk+k+++k++++ e ik++diyk++PwdLpk + +++eke yfF+kr +ky+++ r+nr+t+sg+Wkatg dk+v+s+   +
  Araip.WV14F  10 PGFRFHPTDEELVSFYLKRKLDKKPISI-ELIKQIDIYKYDPWDLPKaSGSGGEKEGYFFCKRGRKYRNSIRPNRVTSSGFWKATGIDKPVYSHggeG 106
                  9***************************.89***************52445577799************************************95544 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +  +glkktLv+y+g+a kg+ktdW+mhe+rl
  Araip.WV14F 107 TDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRL 138
                  445***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100551.6998179IPR003441NAC domain
SuperFamilySSF1019411.1E-529179IPR003441NAC domain
PfamPF023654.9E-2510138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MEEEDDVPLP GFRFHPTDEE LVSFYLKRKL DKKPISIELI KQIDIYKYDP WDLPKASGSG  60
GEKEGYFFCK RGRKYRNSIR PNRVTSSGFW KATGIDKPVY SHGGEGTDCI GLKKTLVYYR  120
GSAGKGTKTD WMMHEFRLPS ATTENNTSLL ANNKNNNNIN NADVAQEAEI WTLCRIFKRN  180
VSQRKHTVDL RSHLVTANSN KHKTTRTHVV QSNNNNINQH QESYINFGAT IIGHHHYHHH  240
RHQNEQKPVT NYTACNNNTD QIQRNNSNHH HHHQLNYHPS SAVATTVPQQ QQQQYHHHHQ  300
LMTAPASNMW INPSAMNDLF AFDDDWDELG SVLKFTVDTP SL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-461018519171NO APICAL MERISTEM PROTEIN
1ut4_B3e-461018519171NO APICAL MERISTEM PROTEIN
1ut7_A3e-461018519171NO APICAL MERISTEM PROTEIN
1ut7_B3e-461018519171NO APICAL MERISTEM PROTEIN
3swm_A4e-461018522174NAC domain-containing protein 19
3swm_B4e-461018522174NAC domain-containing protein 19
3swm_C4e-461018522174NAC domain-containing protein 19
3swm_D4e-461018522174NAC domain-containing protein 19
3swp_A4e-461018522174NAC domain-containing protein 19
3swp_B4e-461018522174NAC domain-containing protein 19
3swp_C4e-461018522174NAC domain-containing protein 19
3swp_D4e-461018522174NAC domain-containing protein 19
4dul_A3e-461018519171NAC domain-containing protein 19
4dul_B3e-461018519171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.WV14F
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169487.10.0transcription factor JUNGBRUNNEN 1-like isoform X1
RefseqXP_025674182.10.0transcription factor JUNGBRUNNEN 1 isoform X1
SwissprotQ9SK552e-86NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A444Y0320.0A0A444Y032_ARAHY; Uncharacterized protein
STRINGGLYMA15G40950.11e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101334112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-87NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]