PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.TL0B5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 234aa    MW: 26723.2 Da    PI: 5.3961
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.TL0B5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.23.9e-202810350128
          NAM  50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  kvk++++ew+fF + ++   ++k  nr+t++gyW+ tgk++ v+ + +++++g+k+tLvfy  ++p+++kt+Wv+hey++
  Araip.TL0B5  28 KVKSDDQEWFFFNELKHI--KNKWCNRKTNAGYWEITGKERIVKGTgTDNVIGTKRTLVFY--KRPHSVKTNWVLHEYHA 103
                  6788999*****998765..5689****************99998867778**********..78999**********95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.7831118IPR003441NAC domain
PfamPF023652.1E-1328102IPR003441NAC domain
SuperFamilySSF1019411.96E-2029116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MLSGFRLLFF ILRVVVHIWL NYIIEQSKVK SDDQEWFFFN ELKHIKNKWC NRKTNAGYWE  60
ITGKERIVKG TGTDNVIGTK RTLVFYKRPH SVKTNWVLHE YHALDQKSNI VLSRVIKNVE  120
KREKKVKRKA SNIIEEEVTC EPCSEMTGYV TEATTEDAII PDACVSSEPQ PPQDIDYEIL  180
SPGQQSSVAH SGNGSNNAPL LPFEGMWKQD AEMNTDIDAD LDAEFLNSVL AGDD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.TL0B5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029146369.11e-113NAC domain-containing protein 62-like isoform X2
TrEMBLA0A445ACS41e-109A0A445ACS4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.15e-19NAC 014