PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.TFA7R
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TCP
Protein Properties Length: 269aa    MW: 30097 Da    PI: 8.5698
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.TFA7RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP40.88.3e-1375170889
          TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec........eaesssssasnsssg........k 89 
                  ++   Tk++ RdR + +  +c    F+  ++LG+ ++sk ++WLl++ak++i++l+ ++ ++++++        + ++s+ +++++ss+        +
  Araip.TFA7R  75 QKQLETKKNERDRFIII-RSCSWPGFKNNKKLGLNQPSKVVDWLLNAAKHEIDDLPPLPIPPSNFTlacypslpT-NKSNHNKEQDSSNntsahvlpN 170
                  67777888888887755.4688888*********************************99999776555555432.2222222222222233334440 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.9E-699179IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MTLLSSIKRN IASIEKKRED NYIKNESMQQ ETSLYLIAIP IHKNNCAQPL FEMCNKWSLH  60
WYYGVGTSCK SIQSQKQLET KKNERDRFII IRSCSWPGFK NNKKLGLNQP SKVVDWLLNA  120
AKHEIDDLPP LPIPPSNFTL ACYPSLPTNK SNHNKEQDSS NNTSAHVLPN SFLLPTTINH  180
NHHPPSFLGL LNTMPSSIGA SQILCCSPSP LPRAAAAATT ATTQSYFSPS SFSHYNNNNV  240
AAAMEIMDPR QINHHHHGDE SSSESCKIT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.TFA7R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016178884.16e-88transcription factor TCP13
RefseqXP_020969320.16e-88transcription factor TCP13
RefseqXP_020969321.16e-88transcription factor TCP13
RefseqXP_025685624.16e-88transcription factor TCP13
TrEMBLA0A445B2R24e-67A0A445B2R2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2868922