PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.QH7DM
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HB-other
Protein Properties Length: 219aa    MW: 24492.2 Da    PI: 10.6866
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.QH7DMgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.73.6e-0746107655
                  S--HHHHHHHHHHHHHSSS..--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
     Homeobox   6 tftkeqleeLeelFeknry..psaeereeLAkkl..........gLterqVkvWFqNrRake 55 
                  +ft+++++e+e+  ++++y  p ++  + LA+k            ++ +qV +WFqN+R+  
  Araip.QH7DM  46 RFTPTEVTEMETILQNHNYamPARDVLTALAEKFseslerkgkiTVQMKQVWNWFQNKRYAI 107
                  6999***********977666999******************99999************865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.18E-936109IPR009057Homeodomain-like
SMARTSM003890.003440114IPR001356Homeobox domain
CDDcd000861.97E-446108No hitNo description
PROSITE profilePS500718.85946110IPR001356Homeobox domain
PfamPF000461.4E-446107IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.1E-746114IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
VRRKFSTFSE SKHLTFSHSH TLSLPGIPLS ASEMGRPPSN GVPAFRFTPT EVTEMETILQ  60
NHNYAMPARD VLTALAEKFS ESLERKGKIT VQMKQVWNWF QNKRYAIRAK SSKTPGKLNI  120
TPMPRDESTT VRNIPQLTAG PIPTTSGSGY FSMLQGAASL PNIACKYFSI DDHSNKLSSS  180
FIMKHSNQLF RLMIILTILF SNRFSPTSID SLSSLSIVF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016188786.13e-78PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2-like
TrEMBLI3S1I73e-60I3S1I7_LOTJA; Uncharacterized protein
TrEMBLA0A0S3S9I59e-60A0A0S3S9I5_PHAAN; Uncharacterized protein
STRINGGLYMA06G35561.11e-54(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2094844
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.34e-45sequence-specific DNA binding transcription factors;sequence-specific DNA binding