PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.PW8UQ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 256aa    MW: 29756.9 Da    PI: 6.0619
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.PW8UQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM139.52.1e-43161362121
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 
                   pGfrFhPt+eel+++yLk+ v gkkl++ +vi  ++iy+++PwdLp  +k +e+ewyfF++rd+k+ tg r+nr+t++g+Wkatg+d+++++    +
  Araip.PW8UQ  16 LPGFRFHPTEEELLDFYLKNMVVGKKLRF-DVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDRKIVTLsdPK 112
                  69*************************99.99***************8888899*************************************9876667 PP

          NAM  98 elvglkktLvfykgrapkgektdW 121
                  + +gl+ktLvfy+grap+g+ktdW
  Araip.PW8UQ 113 RIIGLRKTLVFYEGRAPRGSKTDW 136
                  78********************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-499146IPR003441NAC domain
PROSITE profilePS5100544.85715165IPR003441NAC domain
PfamPF023651.8E-2017136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MIDMGSSSVI DGEVTLPGFR FHPTEEELLD FYLKNMVVGK KLRFDVIGFL NIYHHDPWDL  60
PGLAKVGERE WYFFVPRDRK HGTGGRPNRT TEKGFWKATG SDRKIVTLSD PKRIIGLRKT  120
LVFYEGRAPR GSKTDWDIVL CKIYRKATSL KVLEQRAAIE EEMKQMVGSP ESTPSSTDTM  180
SYEEQQQNQN QNLQLLPTQH VVTKKEVEAE VEEEKMDKIP ELQMPMMITD WTQDTFWAQL  240
NSPWLQNYTY SNILNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-4241461168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.PW8UQ
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016187883.11e-160NAC transcription factor 32
RefseqXP_025642715.11e-160NAC domain-containing protein 22
SwissprotQ10S654e-87NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A445A7M21e-159A0A445A7M2_ARAHY; Uncharacterized protein
STRINGGLYMA12G02540.11e-136(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-93NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]