PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.PNX61
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 308aa    MW: 34840.8 Da    PI: 5.8025
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.PNX61genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.41.1e-26241671128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                  lppG+rFhP++e l+ +yL++k  + +        ++ ++ i+e+d y+++P +Lp        + +++++wy F++ + +  +  +++r++ksg+W 
  Araip.PNX61  24 LPPGCRFHPSEELLLRYYLTNKNGTGNwngngglgFDGSDLIRELDFYDYDPFELPDfacfayGYGGRRRHWYCFTSVRVSRGERWKRKRKVKSGFWL 121
                  79********************9999988888888777789***************44777654445777******9999999988999999****** PP

          NAM  85 atgkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                    g+  +v    ++ + g+++ +vfy g +a++g +tdWv+ ey+l
  Araip.PNX61 122 RRGRVSNVNGVgENVVLGTRTRFVFYMGdSAKNGARTDWVLYEYAL 167
                  ********998566679*********987899************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-3120183IPR003441NAC domain
PROSITE profilePS5100534.39624183IPR003441NAC domain
PfamPF023656.8E-1625167IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MEQEEEPQQN EPPHSHSQSR CVTLPPGCRF HPSEELLLRY YLTNKNGTGN WNGNGGLGFD  60
GSDLIRELDF YDYDPFELPD FACFAYGYGG RRRHWYCFTS VRVSRGERWK RKRKVKSGFW  120
LRRGRVSNVN GVGENVVLGT RTRFVFYMGD SAKNGARTDW VLYEYALVDH VMASYVLCRV  180
FSKPRYKNSA SDIGLSCCAE ESVSAVRHIG IQHDEHVKLD AVEAKVCDDI SIDHNNEICA  240
GGNSDNDNQV KNAHDIDALR CLAGPQGSQQ ERLPLLPSSS TMFIEAISSP QQLLSITEED  300
FIELNDLT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-182218315165NO APICAL MERISTEM PROTEIN
1ut4_B3e-182218315165NO APICAL MERISTEM PROTEIN
1ut7_A3e-182218315165NO APICAL MERISTEM PROTEIN
1ut7_B3e-182218315165NO APICAL MERISTEM PROTEIN
3swm_A3e-182218318168NAC domain-containing protein 19
3swm_B3e-182218318168NAC domain-containing protein 19
3swm_C3e-182218318168NAC domain-containing protein 19
3swm_D3e-182218318168NAC domain-containing protein 19
3swp_A3e-182218318168NAC domain-containing protein 19
3swp_B3e-182218318168NAC domain-containing protein 19
3swp_C3e-182218318168NAC domain-containing protein 19
3swp_D3e-182218318168NAC domain-containing protein 19
4dul_A3e-182218315165NAC domain-containing protein 19
4dul_B3e-182218315165NAC domain-containing protein 19
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190112RRRHWYCFTSVRVSRGERWKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.PNX61
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163090.10.0NAC domain-containing protein 76 isoform X4
RefseqXP_025606940.10.0NAC domain-containing protein 71-like isoform X4
RefseqXP_025660341.10.0NAC domain-containing protein 71-like isoform X4
TrEMBLA0A444YWF30.0A0A444YWF3_ARAHY; Uncharacterized protein
STRINGXP_007160867.11e-100(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130012628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.22e-18NAC domain containing protein 50